BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002B05LP1|AL424907
(1036 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig977 1988 0.0
>3x_Contig977
Length = 3887
Score = 1988 bits (1002), Expect = 0.0
Identities = 1034/1040 (99%), Gaps = 4/1040 (0%)
Strand = Plus / Plus
Query: 1 gatcaatttctttctcaccgacaccctgggactgggtgaaaacttaaataatgggatctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2225 gatcaatttctttctcaccgacaccctgggactgggtgaaaacttaaataatgggatctg 2284
Query: 61 tttcgatgagattgcttcatatttggagcaacaatttgattcggtactcgctgaggagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2285 tttcgatgagattgcttcatatttggagcaacaatttgattcggtactcgctgaggagac 2344
Query: 121 cagaatcaagagaaatccaaggttccaggatacaagagttcatgtcgcgttatactttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2345 cagaatcaagagaaatccaaggttccaggatacaagagttcatgtcgcgttatactttat 2404
Query: 181 tgaacccacgggacatgggttacgtgaattggatgttgaaattatgaagagactatcccg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2405 tgaacccacgggacatgggttacgtgaattggatgttgaaattatgaagagactatcccg 2464
Query: 241 ctacacaaatgttctaccaattgtcgctagagcagattcgttcacacctgatgaattgac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2465 ctacacaaatgttctaccaattgtcgctagagcagattcgttcacacctgatgaattgac 2524
Query: 301 taggttcaagaagagaattatggaagacattgatagatttaacgttcctatctacaaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2525 taggttcaagaagagaattatggaagacattgatagatttaacgttcctatctacaaatt 2584
Query: 361 cgaagttgacgaaaatgaggatgatctagaaacaattgaagagaacaaggcattagcgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2585 cgaagttgacgaaaatgaggatgatctagaaacaattgaagagaacaaggcattagcgag 2644
Query: 421 acttcagccgtttgctattatctgcgccgaccaacgcgataatgctaccggtaaatacta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2645 acttcagccgtttgctattatctgcgccgaccaacgcgataatgctaccggtaaatacta 2704
Query: 481 tcgtgagtttccatggggtaaaattgacatcgataatgaaaacatttcggacttgaaatt 540
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2705 tcgtgagtatccatggggtaaaattgacatcgataatgaaaacatttcggacttgaaatt 2764
Query: 541 gttgaaaagggttctcttcgggtcccatttgcaagagtttaaggacacgacacaaaatct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2765 gttgaaaagggttctcttcgggtcccatttgcaagagtttaaggacacgacacaaaatct 2824
Query: 601 gttgtatgaaaactaccgtgctgagaaattggcgtctgtgccagcctgggacattgaaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2825 gttgtatgaaaactaccgtgctgagaaattggcgtctgtgccagcctgggacattgaaaa 2884
Query: 661 caacgaa-ttatagatacttctatcaatgacgaaaacaatgagggtaattcttcagggtt 719
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2885 caacgaagttatagatacttctatcaatgacgaaaacaatgagggtaattcttcagggtt 2944
Query: 720 gatgaaagggttgactagaaacagtacagctccatccttgtcaaatttcgcctctctaat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2945 gatgaaagggttgactagaaacagtacagctccatccttgtcaaatttcgcctctctaat 3004
Query: 780 aaatacaggaaagtttaagtctcaacaatcacttgcaattccacctcaatctgaaacccc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3005 aaatacaggaaagtttaagtctcaacaatcacttgcaattccacctcaatctgaaacccc 3064
Query: 840 atctacaccacgtctaaccggggtagatgaaggagatgagtctcgcgcttcaatctctgc 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3065 atctacaccacgtctaaccggggtagatgaaggagatgagtctcgcgcttcaatctctgc 3124
Query: 900 cagttcacagaaatctactcctgccaatattcaaacttctccagaaagaacaaagttacg 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3125 cagttcacagaaatctactcctgccaatattcaaacttctccagaaagaacaaagttacg 3184
Query: 960 gaatatttccgaaaatat-ccatacatgcttca-sacgagcgcatagtagcaagg-aaca 1016
|||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||
Sbjct: 3185 gaatatttccgaaaatatcccatacatgcttcagcacgagcgcatagtagcaaggaaaca 3244
Query: 1017 aaagcttgaagaattggagg 1036
||||||||||||||||||||
Sbjct: 3245 aaagcttgaagaattggagg 3264
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8230
Number of Sequences: 1807
Number of extensions: 8230
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 1
length of query: 1036
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1020
effective length of database: 10,329,639
effective search space: 10536231780
effective search space used: 10536231780
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)